BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D07LP1|AL428717
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1599 1756 0.0
>3x_Contig1599
Length = 10178
Score = 1756 bits (885), Expect = 0.0
Identities = 901/906 (99%), Gaps = 1/906 (0%)
Strand = Plus / Minus
Query: 1 atccatcagattcaatctcagtaagtaccatgtccagcatggacgggctcattacaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3971 atccatcagattcaatctcagtaagtaccatgtccagcatggacgggctcattacaggca 3912
Query: 61 atttaggagacgggtgttaatgtgaatgggagtgggaatgggagtttgacatagccatac 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3911 atttaggagacgggtgtaaatgtgaatgggagtgggaatgggagtttgacatagccatac 3852
Query: 121 cacttgacataaaactattcaaatgaactccgaccgcatccactgccgcagtaaaaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3851 cacttgacataaaactattcaaatgaactccgaccgcatccactgccgcagtaaaaggag 3792
Query: 181 aatgtccatttaccaaagtcgaagaaccagctgcagaagaagagtctctgctaatagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3791 aatgtccatttaccaaagtcgaagaaccagctgcagaagaagagtctctgctaatagaca 3732
Query: 241 tcacagcatttaccttgagtttcttcttcttcaattcagtttgtaaccaaactttataag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3731 tcacagcatttaccttgagtttcttcttcttcaattcagtttgtaaccaaactttataag 3672
Query: 301 ctcttatctgatctttagtcaaattgtccggaaacacacaatccaaactgagccttgcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3671 ctcttatctgatctttagtcaaattgtccggaaacacacaatccaaactgagccttgcac 3612
Query: 361 aatctttacaaattggcctatcctctgaacaccttttcttccgtactttgcaagttagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3611 aatctttacaaattggcctatcctctgaacaccttttcttccgtactttgcaagtaagac 3552
Query: 421 atcctttcttcgaatgacgcctacgtttaggctctccttccgaaagatcaacagccatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3551 atcctttcttcgaatgacgcctacgtttaggctctccttccgaaagatcaacagccatct 3492
Query: 481 ttttatcgttcgatcaggatatactgaaaactgtgggaaatctatcgattaaacagcaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3491 ttttatcgttcgatcaggatatactgaaaactgtgggaaatctatcgattaaacagcaac 3432
Query: 541 gtagtgngcccacctatacactttcgaaccaatcaggggtcggtgctaatggaataaata 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3431 gtagtgtgcccacctatacactttcgaaccaatcaggggtcggtgctaatggaataaata 3372
Query: 601 agtggttttcagttgaagcaaacaagcccgagcagttctgatttactataawagacgaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3371 agtggttttcagttgaagcaaacaagcccgagcagttctgatttactataaaagacgaac 3312
Query: 661 cactccgaggctagaggtaaccaaattccaccttacgtctgtctaatgacattcagattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3311 cactccgaggctagaggtaaccaaattccaccttacgtctgtctaatgacattcagattt 3252
Query: 721 catttttcacttccttctttctttttcatgctccacttggatactttaacttcaagccat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3251 catttttcacttccttctttctttttcatgctccacttggatactttaacttcaagccat 3192
Query: 781 caaaaagctttttttaatcttcttaaaacaaataatgaacgacgactcaacttcaacaaa 840
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3191 caaaaagc-ttttttaatcttcttaaaacaaataatgaacgacgactcaacttcaacaaa 3133
Query: 841 agaggtacgagggaccattggaggcagaattcccgtatactagctcatgatgtactgtaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3132 agaggtacgagggaccattggaggcagaattcccgtatactagctcatgatgtactgtaa 3073
Query: 901 cttatt 906
||||||
Sbjct: 3072 cttatt 3067
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7763
Number of Sequences: 1807
Number of extensions: 7763
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)